Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes

uORF translation, AUG start

Gene symbol RefSeq ID
Atp13a2 NM_001173432.1
Bok NM_017312.2
Ccdc92 XM_006249292.1
Cenpq NM_001014215.1
Eif5 XM_006240608.1
Fam53a XM_006251262.1
Ip6k1 XM_006243839.1
LOC691153 NM_001109627.1
Lppr2 XM_006242628.1
Maf1 NM_001014085.1
Mief1 NM_001007709.1
Mmd NM_001007673.1
Pold4 XM_006230841.1
RGD1560212 NM_001077676.1
Rpp14 NM_001108372.2
Scarb1 NM_031541.1
Slc27a4 NM_001100706.1
Slc39a11 XM_006247668.1
Syt9 XM_006229961.1
Tbpl1 NM_001127201.1
Tmem107 NM_001109648.1
Trpm7 NM_053705.2
Zdhhc8 NM_001039021.1
Zfp133 NM_001024313.1

uORF translation, CUG start

Gene symbol RefSeq ID
Anp32e NM_001013200.1
Arfrp1 XM_006235718.1
Cep19 NM_138865.1
Csk XM_006243163.1
Dclre1b XM_006233080.1
Dnajc19 XM_006232259.1
Dynll2 NM_080697.2
Eef2k XM_006230156.1
Eif1a XM_006254688.1
Eif1ad NM_001008305.1
Fam220a NM_001017485.1
Fut1 NM_031236.1
Junb NM_021836.2
LOC361346 XM_006254927.1
Lrrfip2 XM_006243960.1
Lsm2 NM_001165922.1
Mgat4b NM_001127533.1
Nfyb NM_031553.2
Pkmyt1 NM_001105766.1
RGD1564400 XM_001058193.3
Rpl39l NM_001195471.1
Srd5a1 NM_017070.3
Taok2 XM_006230331.1
Tmem230 NM_001048043.1
Wbp5 NM_001127502.1
Zfp428 XM_006228447.1

uORF translation, start site not known

Gene symbol RefSeq ID
Akr1a1 NM_031000.3
Bbs9 XM_001074631.4
Cdc42se1 NM_001039044.1
Cks2 NM_001126083.1
Cnppd1 NM_199112.1
Dlk1 NM_053744.1
Eif1ax NM_001106963.1
Eif4g2 NM_001017374.2
Grb2 NM_030846.2
Map3k9 XM_006240303.1
Polr2m NM_183402.1
Rab34 NM_001012140.1
Tatdn2 NM_001109252.1
Tor1aip2 NM_001165897.1
Vegfa NM_001110333.2
Zfp706 NM_001126087.1
Zfp868 XM_006252916.1

uORF translation, multiple uORFs

Gene symbol RefSeq ID
Jun NM_021835.3
LOC100911699 XM_003751181.2
Ubl3 NM_001015030.1

frameshifting/dual coding

Gene symbol RefSeq ID
Amn XM_006240588.1
Romo1 NM_001195490.1
RGD1307752 NM_001013922.1

N-terminal extension

Gene symbol RefSeq ID
Adm NM_012715.1
Bcl2l11 XM_006234986.1
Fam178b XM_006244842.1
Ppp1r2 NM_138823.2
Ptms NM_031975.2

stop codon readthrough

Gene symbol RefSeq ID
Fkbp1a NM_013102.3
Hadhb NM_133618.2
Hs1bp3 XM_233975.7
Klc1 NM_001081974.1
LOC102554884 XM_006240612.1
Mdh1 NM_033235.1
Mrto4 XM_006239178.1
Nedd8 NM_138878.2
Nudcd2 NM_001009621.2
Plat NM_013151.2
Polr2l NM_001143911.1
Ppp4c XM_006230206.1
Rfc2 NM_053786.1
Rnf111 XM_006243373.1
Sec13 NM_001006978.1
Slc7a1 NM_013111.2
Ssna1 XM_006233613.1
Thy1 NM_012673.2

bicistronic

Gene symbol RefSeq ID
Eif1b NM_001106867.1
Mien1 NM_001108296.1
Ost4 NM_001134691.1
RGD1565784 NM_001109028.1
Rpp14 NM_001108372.2
Ubl3 NM_001015030.1