Table 1a

(Note: MLOGD was also applied in the +1 and +2 reading frames as a form of 'negative control'.)

alignment MLOGD results MLOGD scores Nsubs MLOGD / Nsubs Ka/Ks
+0+1+2 all positionswithout gaps
NM_001042589+0+1+271.69-84.35-73.601180.620.0360.036
NM_001037335+0+1+253.32-58.74-60.202470.210.1850.185
NM_001010858+0+1+245.37-34.04-43.69850.540.1050.105
NM_001136108+0+1+251.31-83.12-84.342640.190.1980.199
NM_003760+0+1+226.61-27.56-28.02840.310.1360.134
NM_006375+0+1+234.12-29.87-23.821660.200.1380.139
NM_176677+0+1+233.61-43.52-52.002030.160.2080.211
NM_153756+0+1+218.47-11.91-19.85290.690.0610.061
NM_006688+0+1+217.50-24.79-21.18320.530.0230.023
NM_145008+0+1+227.12-36.99-36.57440.620.0260.026
NM_182528+0+1+219.52-17.35-28.82330.590.0220.022
NM_000314+0+1+211.26-21.73-16.25370.290.1700.176
NM_139239+0+1+225.37-27.18-25.601450.180.2740.270
NM_001015072+0+1+218.84-43.61-24.07720.250.1910.191
NM_020153+0+1+231.79-20.90-24.771290.250.1970.197
NM_001005404+0+1+225.32-27.42-20.50430.590.0410.041
NM_020335+0+1+29.04-11.29-10.85240.350.0690.069
NM_017457+0+1+216.03-29.75-34.89530.310.1720.172
NM_001010908+0+1+211.21-6.41-17.26170.670.0000.000
NM_001008223+0+1+223.04-17.13-17.56520.450.0710.071
NM_001002914+0+1+214.33-16.41-14.42280.500.0350.035
NM_025160+0+1+214.32-36.66-24.53800.180.2400.255
NM_005078+0+1+23.68-25.28-26.37630.050.3990.399
NM_002250+0+1+22.74-7.32-19.11300.100.3670.367
NM_004494+0+1+29.53-19.17-12.23370.240.2740.274
NM_013313+0+1+29.86-22.59-16.52710.140.1880.194
NM_022106+0+1+2-1.56-5.50-6.5766-0.030.3950.388
NM_006079+0+1+21.81-5.63-9.84220.090.2460.246
NM_182603+0+1+2-94.17-130.06-121.071069-0.090.4570.420
NM_014310+0+1+2-9.31-43.09-51.15159-0.060.4250.424
NM_002506+0+1+20.11-7.57-15.051130.000.6390.556
NM_152283+0+1+28.05-17.04-17.742470.040.3480.345
NM_001102654+0+1+2-3.40-0.67-8.0859-0.060.4260.426
NM_003252+0+1+2-12.92-30.81-4.6679-0.170.6760.676
NM_024794+0+1+28.88-29.03-19.39910.100.4330.391
NM_018646+0+1+21.56-38.63-13.321390.010.4380.438
NM_033315+0+1+2-4.78-8.53-8.9239-0.120.4410.418
NM_001080510+0+1+2-0.36-26.02-23.77840.000.4330.432
NM_023110+0+1+2-9.22-5.033.7750-0.180.6840.684
NM_153369+0+1+2-2.32-7.95-27.1371-0.020.5440.559
NM_001144886+0+1+2-2.86-12.17-8.3471-0.041.0391.039
NM_006645+0+1+2-10.80-10.95-11.5863-0.170.7430.739